Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments
Identifieur interne : 000078 ( Main/Exploration ); précédent : 000077; suivant : 000079Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments
Auteurs : Mathilde Jeanbille [France] ; Jérôme Gury [France] ; Robert Duran [France] ; Jacek Tronczynski [France] ; Jean-François Ghiglione [France] ; Hélène Agogué [France] ; Olfa Ben Saïd [Tunisie] ; Najwa Taïb [France] ; Didier Debroas [France] ; Cédric Garnier [France] ; Jean-Christophe Auguet [France]Source :
- Frontiers in Microbiology [ 1664-302X ] ; 2016.
Abstract
Benthic microorganisms are key players in the recycling of organic matter and recalcitrant compounds such as polyaromatic hydrocarbons (PAHs) in coastal sediments. Despite their ecological importance, the response of microbial communities to chronic PAH pollution, one of the major threats to coastal ecosystems, has received very little attention. In one of the largest surveys performed so far on coastal sediments, the diversity and composition of microbial communities inhabiting both chronically contaminated and non-contaminated coastal sediments were investigated using high-throughput sequencing on the 18S and 16S rRNA genes. Prokaryotic alpha-diversity showed significant association with salinity, temperature, and organic carbon content. The effect of particle size distribution was strong on eukaryotic diversity. Similarly to alpha-diversity, beta-diversity patterns were strongly influenced by the environmental filter, while PAHs had no influence on the prokaryotic community structure and a weak impact on the eukaryotic community structure at the continental scale. However, at the regional scale, PAHs became the main driver shaping the structure of bacterial and eukaryotic communities. These patterns were not found for PICRUSt predicted prokaryotic functions, thus indicating some degree of functional redundancy. Eukaryotes presented a greater potential for their use as PAH contamination biomarkers, owing to their stronger response at both regional and continental scales.
Url:
DOI: 10.3389/fmicb.2016.01303
PubMed: 27594854
PubMed Central: 4990537
Affiliations:
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xml:lang="fr">France</country><wicri:regionArea></wicri:regionArea></affiliation></author></analytic><series><title level="j">Frontiers in Microbiology</title><idno type="eISSN">1664-302X</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Benthic microorganisms are key players in the recycling of organic matter and recalcitrant compounds such as polyaromatic hydrocarbons (PAHs) in coastal sediments. Despite their ecological importance, the response of microbial communities to chronic PAH pollution, one of the major threats to coastal ecosystems, has received very little attention. In one of the largest surveys performed so far on coastal sediments, the diversity and composition of microbial communities inhabiting both chronically contaminated and non-contaminated coastal sediments were investigated using high-throughput sequencing on the 18S and 16S rRNA genes. Prokaryotic alpha-diversity showed significant association with salinity, temperature, and organic carbon content. The effect of particle size distribution was strong on eukaryotic diversity. Similarly to alpha-diversity, beta-diversity patterns were strongly influenced by the environmental filter, while PAHs had no influence on the prokaryotic community structure and a weak impact on the eukaryotic community structure at the continental scale. However, at the regional scale, PAHs became the main driver shaping the structure of bacterial and eukaryotic communities. These patterns were not found for PICRUSt predicted prokaryotic functions, thus indicating some degree of functional redundancy. Eukaryotes presented a greater potential for their use as PAH contamination biomarkers, owing to their stronger response at both regional and continental scales.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Acosta Gonzalez, A" uniqKey="Acosta Gonzalez A">A. Acosta-González</name></author><author><name sortKey="Rossell M Ra, R" uniqKey="Rossell M Ra R">R. Rosselló-Móra</name></author><author><name sortKey="Marques, S" uniqKey="Marques S">S. Marqués</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ager, D" uniqKey="Ager D">D. Ager</name></author><author><name sortKey="Evans, S" uniqKey="Evans S">S. 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Zhang</name></author><author><name sortKey="Ki, J S" uniqKey="Ki J">J.-S. Ki</name></author><author><name sortKey="Qian, P Y" uniqKey="Qian P">P.-Y. Qian</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>France</li><li>Tunisie</li></country></list><tree><country name="France"><noRegion><name sortKey="Jeanbille, Mathilde" sort="Jeanbille, Mathilde" uniqKey="Jeanbille M" first="Mathilde" last="Jeanbille">Mathilde Jeanbille</name></noRegion><name sortKey="Agogue, Helene" sort="Agogue, Helene" uniqKey="Agogue H" first="Hélène" last="Agogué">Hélène Agogué</name><name sortKey="Auguet, Jean Christophe" sort="Auguet, Jean Christophe" uniqKey="Auguet J" first="Jean-Christophe" last="Auguet">Jean-Christophe Auguet</name><name sortKey="Debroas, Didier" sort="Debroas, Didier" uniqKey="Debroas D" first="Didier" last="Debroas">Didier Debroas</name><name sortKey="Duran, Robert" sort="Duran, Robert" uniqKey="Duran R" first="Robert" last="Duran">Robert Duran</name><name sortKey="Garnier, Cedric" sort="Garnier, Cedric" uniqKey="Garnier C" first="Cédric" last="Garnier">Cédric Garnier</name><name sortKey="Ghiglione, Jean Francois" sort="Ghiglione, Jean Francois" uniqKey="Ghiglione J" first="Jean-François" last="Ghiglione">Jean-François Ghiglione</name><name sortKey="Gury, Jerome" sort="Gury, Jerome" uniqKey="Gury J" first="Jérôme" last="Gury">Jérôme Gury</name><name sortKey="Taib, Najwa" sort="Taib, Najwa" uniqKey="Taib N" first="Najwa" last="Taïb">Najwa Taïb</name><name sortKey="Tronczynski, Jacek" sort="Tronczynski, Jacek" uniqKey="Tronczynski J" first="Jacek" last="Tronczynski">Jacek Tronczynski</name></country><country name="Tunisie"><noRegion><name sortKey="Said, Olfa Ben" sort="Said, Olfa Ben" uniqKey="Said O" first="Olfa Ben" last="Saïd">Olfa Ben Saïd</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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